SubtiBank SubtiBank
Version comparison:

2018-03-18 11:59:432025-05-10 14:50:57

locus

BSU24550

BSU_24550

geneLength

1464

1467

outlinks

bsu

BSU24550

BSU_24550

Gene

Coordinates

2,545,410 → 2,546,876

2,545,410 2,546,876

The protein

Catalyzed reaction/ biological activity

Glycine + H-protein-lipoyllysine = H-protein-S-aminomethyldihydrolipoyllysine + CO2 (according to Swiss-Prot)

glycine + H+ + N6-lipoyl-L-lysyl-[glycine-cleavage complex H protein] --> (R)-N6-(S8-aminomethyldihydrolipoyl)-L-lysyl-[glycine-cleavage complex H protein] + CO2 (according to UniProt)

The protein

Protein family

C-terminal subunit subfamily (according to Swiss-Prot)

GcvP family (with [[protein|GcvPA]], according to UniProt)

The protein

Structure

[PDB|1WYT] (56% identity)

[PDB|1WYT] (the [[protein|GcvPA]]-[[protein|GcvPB]] complex from Thermus thermophilus, 56% identity) [pubmed|15791207]

The protein

[SW|Localization]

membrane (according to Swiss-Prot)

cytoplasm (according to UniProt)

Biological materials

Mutant

MGNA-C470 (yqhK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2468 NBRP B. subtilis, Japan]

BKE24550 (Δ[[gene|gcvPB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE24550 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCAAAAATAAGTGCCTGGT, downstream forward: _UP4_TAAATAAAAACAGCTGTCTA

BKK24550 (Δ[[gene|gcvPB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK24550 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCAAAAATAAGTGCCTGGT, downstream forward: _UP4_TAAATAAAAACAGCTGTCTA

MGNA-C470 (yqhK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2468 NBRP B. subtilis, Japan]

BKE24550 ([[gene|gcvPB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE24550 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCAAAAATAAGTGCCTGGT, downstream forward: _UP4_TAAATAAAAACAGCTGTCTA

BKK24550 ([[gene|gcvPB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK24550 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCAAAAATAAGTGCCTGGT, downstream forward: _UP4_TAAATAAAAACAGCTGTCTA

References

12107147, 15472076, 28516784

12107147, 15472076, 28516784, 15791207

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Cofactors]

pyridoxal phosphate (according to UniProt)